Mostrar el registro sencillo del ítem
Physico-Chemical and structural interpretation of discrete derivative indices on N-tuples atoms
dc.creator | Martínez-Santiago, O. | |
dc.creator | Marrero-Ponce, Y. | |
dc.creator | Barigye, S.J. | |
dc.creator | Thu, H.L.T. | |
dc.creator | Torres, Javier | |
dc.creator | Zambrano, C.H. | |
dc.creator | Muñiz Olite, J.L. | |
dc.creator | Cruz-Monteagudo, M. | |
dc.creator | Vivas-Reyes, R. | |
dc.creator | Infante, L.V. | |
dc.creator | Artiles Martínez, L.M. | |
dc.date.accessioned | 2019-11-06T19:05:17Z | |
dc.date.available | 2019-11-06T19:05:17Z | |
dc.date.issued | 2016 | |
dc.identifier.citation | International Journal of Molecular Sciences; Vol. 17, Núm. 6 | |
dc.identifier.issn | 1661-6596 | |
dc.identifier.uri | https://hdl.handle.net/20.500.12585/8747 | |
dc.description.abstract | This report examines the interpretation of the Graph Derivative Indices (GDIs) from three different perspectives (i.e., in structural, steric and electronic terms). It is found that the individual vertex frequencies may be expressed in terms of the geometrical and electronic reactivity of the atoms and bonds, respectively. On the other hand, it is demonstrated that the GDIs are sensitive to progressive structural modifications in terms of: size, ramifications, electronic richness, conjugation effects and molecular symmetry. Moreover, it is observed that the GDIs quantify the interaction capacity among molecules and codify information on the activation entropy. A structure property relationship study reveals that there exists a direct correspondence between the individual frequencies of atoms and Hückel’s Free Valence, as well as between the atomic GDIs and the chemical shift in NMR, which collectively validates the theory that these indices codify steric and electronic information of the atoms in a molecule. Taking in consideration the regularity and coherence found in experiments performed with the GDIs, it is possible to say that GDIs possess plausible interpretation in structural and physicochemical terms. © 2016 by the authors; licensee MDPI, Basel, Switzerland. | eng |
dc.format.medium | Recurso electrónico | |
dc.format.mimetype | application/pdf | |
dc.language.iso | eng | |
dc.publisher | MDPI AG | |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | |
dc.source | https://www2.scopus.com/inward/record.uri?eid=2-s2.0-85015581550&doi=10.3390%2fijms17060812&partnerID=40&md5=8979a8518765b7d09dde96eb958ba037 | |
dc.source | Scopus 24824951000 | |
dc.source | Scopus 55665599200 | |
dc.source | Scopus 55363486500 | |
dc.source | Scopus 57189382397 | |
dc.source | Scopus 16025887100 | |
dc.source | Scopus 14040865600 | |
dc.source | Scopus 57189386344 | |
dc.source | Scopus 7801534311 | |
dc.source | Scopus 6506303343 | |
dc.source | Scopus 57189385865 | |
dc.source | Scopus 55364050900 | |
dc.title | Physico-Chemical and structural interpretation of discrete derivative indices on N-tuples atoms | |
dcterms.bibliographicCitation | Putz, M.V., Lacrămă, A.-M., Introducing spectral structure activity relationship (S-SAR) analysis. Application to ecotoxicology (2007) Int. J. Mol. Sci, 8, pp. 363-391. , [CrossRef] | |
dcterms.bibliographicCitation | Estrada, E., Molina, E., Novel local (fragment-based) topological molecular descriptors for QSPR/QSAR and molecular design (2001) J. Mol. Graph. Model, 20, pp. 54-64. , [CrossRef] | |
dcterms.bibliographicCitation | Barigye, S.J., Marrero-Ponce, Y., Martínez López, Y., Martínez-Santiago, O., Torrens, F., Domenech, R.G., Galvez, J., Event-based criteria in GT-STAF information indices: Theory, exploratory diversity analysis and QSPR applications (2013) SAR QSAR Environ. Res, 24, pp. 3-34. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Todeschini, R., Consonni, V., (2009) Molecular Descriptors for Chemoinformatics, 1-2. , Wiley-VCH: Hoboken, NJ, USA | |
dcterms.bibliographicCitation | Devillers, J., Balaban, A.T., (1999) Topological Indices and Related Descriptors in QSAR and QSPR, , Gordon and Breach: Amsterdam, The Netherlands | |
dcterms.bibliographicCitation | Gutman, T., Ruscic, B., Trinajstic, N., Wilcox, C.F., Graph Theory and Molecular Orbitals. XII. Acyclic Polyenes (1975) J. Chem. Phys, 62, 3399p. , [CrossRef] | |
dcterms.bibliographicCitation | Organisation for Economic Co-Operation and Development, (2007) Guidance Document on the Validation of (Quantitative) Structure-Activity Relationship [(Q)SAR] Models, 154p. , OECD: Paris, France | |
dcterms.bibliographicCitation | Barigye, S.J., Marrero-Ponce, Y., Zupan, J., Pérez-Giménez, F., Freitas, M.P., Structural and physicochemical interpretation of GT-STAF information theory-based indices (2015) Bull. Chem. Soc. Jpn, 88, pp. 97-109. , [CrossRef] | |
dcterms.bibliographicCitation | Hoffmann, R., Qualitative thinking in the age of modern computational chemistry-Or what Lionel Salem knows (1998) J. Mol. Struct. THEOCHEM, 424, 3p. , [CrossRef] | |
dcterms.bibliographicCitation | Marrero-Ponce, Y., Martínez-Santiago, O., Martínez López, Y., Barigye, S.J., Torrens, F., Derivatives in discrete mathematics: A novel graph-theoretical invariant for generating new 2/3D molecular descriptors. I. Theory and QSPR application (2012) J. Comput. Aided Mol. Des, 26, pp. 1229-1246. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Martínez-Santiago, O., Millán Cabrera, R., Marrero-Ponce, Y., Barigye, S.J., Martínez-López, Y., Torrens, F., Pérez-Giménez, F., Discrete derivatives for atom-pairs as a novel graph-theoretical invariant for generating new molecular descriptors: Orthogonality, interpretation and QSARs/QSPRs on benchmark databases (2014) J. Mol. Inform, 33, pp. 343-368. , [CrossRef] | |
dcterms.bibliographicCitation | Martínez Santiago, O., Marrero-Ponce, Y., Millán Cabrera, R., Barigye, S., Martínez-López, Y., Artiles Martínez, L.M., Guerra de León, J.O., Torrens, F., Extending graph (discrete) derivative descriptors to n-tuple atom-relations (2015) MATCH Commun. Math. Comput. Chem, 73, pp. 397-420 | |
dcterms.bibliographicCitation | Gorbátov, V.A., (1988) Fundamentos de la Matemática Discreta, , Editorial Mir: Moscú, Russia | |
dcterms.bibliographicCitation | Avery, J., (1972) The Quantum Theory of Atoms, Molecules and Photons, , McGraw-Hill Book Company (UK) Ltd.: London, UK | |
dcterms.bibliographicCitation | Cockett, M., Doggett, G., (2003) Maths for Chemists, , Royal Society of Chemistry: Cambridge, UK, Volume 1 | |
dcterms.bibliographicCitation | Martínez Santiago, O., Millán Cabrera, R., Marrero-Ponce, Y., Barigye, S.J., Martínez López, Y., Torrens, F., Topo-Chemical Extended Indices Derived from Event-Based Graph Derivative. Theory, Analysis and QSPR Validation Curr. Pharm. Des, , revision | |
dcterms.bibliographicCitation | Barigye, S.J., Marrero-Ponce, Y., Martínez-López, Y., Artiles Martínez, L.M., Pino-Urias, R.W., Martínez-Santiago, O., Torrens, F., Relations frequency hypermatrices in mutual, conditional and joint entropy-based information indices (2013) J. Comput. Chem, 34, pp. 259-274. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Balaban, A.T., Numerical Modelling of Chemical Structures: Local Graph Invariants and Topological Indices (1987) Graph Theory and Topology in Chemistry, pp. 159-176. , King, R.B., Rouvray, D.H., Eds. | |
dcterms.bibliographicCitation | Elsevier: Amsterdam, The Netherlands | |
dcterms.bibliographicCitation | Ivanciuc, O., Balaban, T.S., Balaban, A.T., Design of topological indices. Part 4. Reciprocal distance matrix, related local vertex invariants and topological indices (1993) J. Math. Chem, 12, pp. 309-318. , [CrossRef] | |
dcterms.bibliographicCitation | Magnasco, V., (2010) Models for Bonding in Chemistry, , John Wiley & Sons, Ltd.: Hoboken, NJ, USA | |
dcterms.bibliographicCitation | Levine, I.N., (2001) Química Cuántica, , Pearson Educación: Madrid, Spain | |
dcterms.bibliographicCitation | Atkins, P., Friedman, R., (2005) Molecular Quantum Mechanics, , Oxford University Press: New York, NY, USA | |
dcterms.bibliographicCitation | García-Jacas, C.R., Marrero-Ponce, Y., Barigye, S.J., Valdés-Martiní, J.R., Rivera-Borroto, O.M., Verbel, O., N-linear algebraic maps to codify chemical structures: Is a suitable generalization to the atom-pairs approaches? (2014) Curr. Drug Metab, 15, pp. 441-469. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | García-Jacas, C.R., Marrero-Ponce, Y., Acevedo-Martínez, L., Barigye, S.J., Valdés-Martiní, J.R., Contreras-Torres, E., QuBiLS-MIDAS: A parallel free-software for molecular descriptors computation based on multi-linear algebraic maps (2014) J. Comput. Chem, 35, pp. 1395-1409. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Marrero-Ponce, Y., Martínez Santiago, O., Barigye, S.J., (2013) Divati 1. 0, , Unit of Computer-Aided Molecular "Biosilico" Discovery and Bioinformatic Research (CAMD-BIR Unit): Santa Clara, Cuba | |
dcterms.bibliographicCitation | Todeschini, R., Ballabio, D., Consonni, V., Mauri, A., Pavan, M., (2004) Mobydigs. Version 1. 0, , Talete SRL Ed.: Milano, Italy | |
dcterms.bibliographicCitation | Leardi, R., (2003) Nature-Inspired Methods in Chemometrics: Genetic Algorithms and Artificial Neural Networks, , Department of Pharmaceutical and Food Chemistry and Technology, University of Genova: Genova, Italy | |
dcterms.bibliographicCitation | Randic, M., Generalized molecular descriptors (1991) J. Math. Chem, 7, 155p. , [CrossRef] | |
dcterms.bibliographicCitation | Guerasimov, Y., Dreving, V., Eriomin, E., Kiseliov, A., Lebedev, V., Panchenkov, G., Shliguin, A., (1971) Curso de Química Física Tomo II, , Editorial Mir: Moscú, Russia | |
dcterms.bibliographicCitation | Frost, A.A., Pearson, R.G., (1961) Kinetics and Mechanism, , 2nd ed. | |
dcterms.bibliographicCitation | Wiley: New York, NY, USA | |
dcterms.bibliographicCitation | Kier, L.B., Hall, L.H., Molecular connectivity: Intermolecular accessibility and encounter simulation (2011) J. Mol. Graph. Model, 20, pp. 76-83. , [CrossRef] | |
dcterms.bibliographicCitation | Kier, L.B., Hall, L.H., Intermolecular accessibility: The meaning of molecular connectivity (2000) J. Chem. Inf. Comput. Sci, 40, pp. 792-795. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Estrada, E., The Structural Interpretation of the Randic Index (2002) Internet Electron. J. Mol. Des, 1, pp. 360-366 | |
dcterms.bibliographicCitation | Estrada, E., Physicochemical interpretation of molecular connectivity indices (2002) J. Phys. Chem. A, 106, pp. 9085-9091. , [CrossRef] | |
dcterms.bibliographicCitation | Tudoran, M.A., Putz, M.V., Molecular graph theory: From adjacency information to colored topology by chemical reactivity (2015) Curr. Org. Chem, 19, pp. 359-386. , [CrossRef] | |
dcterms.bibliographicCitation | Putz, M.V., Tudoran, M.A., Ori, O., Topological organic chemistry: From distance matrix to Timisoara eccentricity (2015) Curr. Org. Chem, 19, pp. 249-273. , [CrossRef] | |
dcterms.bibliographicCitation | Estrada, E., Molina, E., 3D conectivity indices in QSPR/QSAR studies (2001) J. Chem. Inf. Comput. Sci, 41, 791p. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Ortiz del Toro, P.J., Pérez Martínez, C.S., (1984) Química Cuántica. Elementos de Estructura Molecular, , MES (acronym of Ministerio de Eduación Superior): Ciudad de la Habana, Cuba | |
dcterms.bibliographicCitation | Kier, L.B., Hall, L.H., The e-state as an extended free valence (1997) J. Chem. Inf. Comput. Sci, 37, pp. 548-552. , [CrossRef] | |
dcterms.bibliographicCitation | Kier, L.B., Hall, L.H., (1999) Molecular Structure Description. The Electrotopological State, , Academic Press: San Diego, CA, USA | |
dcterms.bibliographicCitation | Pérez Martínez, C.S., Ortiz del Toro, P.J., Alonso Becerra, E., (1983) Resonancia Magnética Nuclear, , MES (acronym of Ministerio de Eduación Superior): Ciudad de la Habana, Cuba | |
dcterms.bibliographicCitation | Cambridgesoft-Corporation, (2003) Chemdraw, , Cambridgesoft-Corporation: Cambridge, MA, USA | |
dcterms.bibliographicCitation | Morrison, R.T., Boyd, R.N., (1992) Organic Chemistry, , 7th ed. | |
dcterms.bibliographicCitation | Prentice-Hall Inc.: New Jersey, USA | |
dcterms.bibliographicCitation | Putz, M.V., Compactness aromaticity of atoms in molecules (2010) Int. J. Mol. Sci, 11, pp. 1269-1310. , [CrossRef] [PubMed] | |
dcterms.bibliographicCitation | Sachs, H., (1964) Beziehungen Zwischen den in Einem Graphen Enthaltenen Kreisen und Seinem Characteristischen Polynom, 11. , Debrecen, Hungary | |
dcterms.bibliographicCitation | Skvortsova, M.I., Stankevich, I.V., Eigenvectors of weighted graphs: A supplement to Sachs' theorem (2005) J. Mol. Struct, 719, pp. 213-223. , [CrossRef] | |
dcterms.bibliographicCitation | Gutman, I., Impact of the Sachs theorem on theoretical chemistry: A participant's testimony (2003) MATCH Commun. Math. Comput. Chem, 48, pp. 17-34 | |
datacite.rights | http://purl.org/coar/access_right/c_abf2 | |
oaire.resourceType | http://purl.org/coar/resource_type/c_6501 | |
oaire.version | http://purl.org/coar/version/c_970fb48d4fbd8a85 | |
dc.type.driver | info:eu-repo/semantics/article | |
dc.type.hasversion | info:eu-repo/semantics/publishedVersion | |
dc.identifier.doi | 10.3390/ijms17060812 | |
dc.subject.keywords | 17O-RMN | |
dc.subject.keywords | Activation entropy | |
dc.subject.keywords | Derivative indices | |
dc.subject.keywords | Discrete derivative | |
dc.subject.keywords | Free valence | |
dc.subject.keywords | GDIs | |
dc.subject.keywords | Reactivity | |
dc.subject.keywords | Resonance energy | |
dc.subject.keywords | Structural interpretation | |
dc.subject.keywords | Chemical binding | |
dc.subject.keywords | Conjugation | |
dc.subject.keywords | Entropy | |
dc.subject.keywords | Proton nuclear magnetic resonance | |
dc.subject.keywords | Quantitative study | |
dc.subject.keywords | Theoretical model | |
dc.subject.keywords | Writing | |
dc.subject.keywords | Algorithm | |
dc.subject.keywords | Chemistry | |
dc.subject.keywords | Computer graphics | |
dc.subject.keywords | Drug design | |
dc.subject.keywords | Entropy | |
dc.subject.keywords | Drug | |
dc.subject.keywords | Algorithms | |
dc.subject.keywords | Computer graphics | |
dc.subject.keywords | Drug design | |
dc.subject.keywords | Entropy | |
dc.subject.keywords | Pharmaceutical Preparations | |
dc.rights.accessrights | info:eu-repo/semantics/openAccess | |
dc.rights.cc | Atribución-NoComercial 4.0 Internacional | |
dc.identifier.instname | Universidad Tecnológica de Bolívar | |
dc.identifier.reponame | Repositorio UTB | |
dc.description.notes | Pharmaceutical Preparations | |
dc.type.spa | Artículo |
Ficheros en el ítem
Este ítem aparece en la(s) siguiente(s) colección(ones)
-
Productos de investigación [1453]
Universidad Tecnológica de Bolívar - 2017 Institución de Educación Superior sujeta a inspección y vigilancia por el Ministerio de Educación Nacional. Resolución No 961 del 26 de octubre de 1970 a través de la cual la Gobernación de Bolívar otorga la Personería Jurídica a la Universidad Tecnológica de Bolívar.